Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FSLCNMSEDDLMTCKPAVS----K-PSPVDPSPECCKALSGADLTCLCSYKNSET------LPFLG---------IDPDLAMALPSKCNLTPPASC
1HSS Chain:A ((12-106))
-----FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16166 for 413 contacts (-39.1/contact) +
2D Compatibility (PS) -6732 + (NN) -1250 + (LL) 308
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -26490.0 ( -64.14 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: