Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DKCGNQIQGLLNKCSPILLGKSPSAACCGLIRSADMGCVCPKVTPQIAKQI-------------NVSKVVSVVKSCGRNVPHRTRCGSIVTP
2DS2 Chain:B ((7-69))
-----------------------LRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGA--CPF----
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24253 for 303 contacts (-80.0/contact) +
2D Compatibility (PS) -5155 + (NN) -406 + (LL) 1028
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -31286.0 ( -103.25 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: