Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NGPCSNTLSSLSACMPAIE----G-ENPQSPSVACCDVVRGSDASCLCSIVTTYANL----TDAMG---------INLRAALLLPKQCKRAVPSGFTCGEID
1HSS Chain:A ((13-103))
------QVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPI----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50047 for 399 contacts (-125.4/contact) +
2D Compatibility (PS) -6645 + (NN) -1713 + (LL) -380
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -61785.0 ( -154.85 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: