Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EMAHGVCNLSSAGIRACQPAAAIRN---PTD----------QPSSECCAALAGADLACLCRYKNAAGVWV---RFYR-----IDINRAMGLPGKCGLAMPANC
1SM7 Chain:A ((14-104))
------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36334 for 466 contacts (-78.0/contact) +
2D Compatibility (PS) -7199 + (NN) 1618 + (LL) 760
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -43655.0 ( -93.68 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: