Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPQQSCTASLTGLNVCAPFLVPGSPTASTECCNAVQSINHDCMCNTMR-----------------------IAAQIPAQCNLPP-LSCSAN
2DS2 Chain:B ((8-69))
----------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACPF-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25704 for 204 contacts (-126.0/contact) +
2D Compatibility (PS) -4075 + (NN) -3283 + (LL) 928
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -36734.0 ( -180.07 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: