Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQPSCAAQLTQLAPCARVGVAPAPGQPLPAPPAECCSALGAVSHDCACG------TLDIINSLPAK-----CGLPRVTCH
1L6H Chain:A ((1-69))
--AGCNA--GQLTVCTGAIAGGAR------PTAACCSSLRA-QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32606 for 392 contacts (-83.2/contact) +
2D Compatibility (PS) -6078 + (NN) -5198 + (LL) 716
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -47516.0 ( -121.21 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: