Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDEECLAGIGNLISCDPYVIPGANQGSPSKECCSALGGVKQSCYCTAID-----------------------IISNLPARCSLPA-VNCA
2DS2 Chain:B ((8-68))
-----------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACP
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23765 for 197 contacts (-120.6/contact) +
2D Compatibility (PS) -3703 + (NN) -507 + (LL) 592
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -31583.0 ( -160.32 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: