Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDRMALKLAPCASAAQNPSSAPSNGCCTAVHTIGK-------QSPQCLCAVMLSKTAKKS-GIKPEVAITIPKRCNLVDRPVGYKCGDYTLP
2ALG Chain:A ((2-79))
------ITCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL-SASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18423 for 453 contacts (-40.7/contact) +
2D Compatibility (PS) -7202 + (NN) -4134 + (LL) 488
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -33171.0 ( -73.23 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: