Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVALKLAPCAAATQNPRAAVPPSCCAQVRAIGR--VPKCLCAVMLSDTARKAGVKPAVAMTI-PKRCAIANRPVGYKCGPYTLP
1HYP Chain:A ((10-79))
--------------DLSICLNILGG-SLGTVDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGR-SYPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42459 for 416 contacts (-102.1/contact) +
2D Compatibility (PS) -6605 + (NN) -732 + (LL) 992
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -52204.0 ( -125.49 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: