Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDTVALRLAPCASAAEDPGSAPSGSCCSAVHAIGKQ-------SPRCLCAVMLSNTARSA-GIKAEVAITIPKRCNLADR-PVGYKCGDYTLP
1SIY Chain:A ((2-82))
-------TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KA-AAGAVRGINPNNAEALPGKCGVNIPYKIS---------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38168 for 530 contacts (-72.0/contact) +
2D Compatibility (PS) -7540 + (NN) -4055 + (LL) 448
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -53765.0 ( -101.44 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: