Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSSPDNEA--MKLAPCAEAAQDEKAA-----------------VSDSCCLQVKRMGQKPSCLCAVMLSDTA---KAS-G--V---KIETAITIPKRCNIANRPVGYKCGGYTLP
1W2Q Chain:A ((16-112))
--------CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16272 for 442 contacts (-36.8/contact) +
2D Compatibility (PS) -7256 + (NN) -2348 + (LL) -84
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -30910.0 ( -69.93 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: