Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLTAVGNVRASVPPACCSKVGALIKTAPKCLCAVLLSPL---A---MQAG--------IKPGIAITIPKRCNIKNRPVGKKCGRYTVP
1HSS Chain:A ((37-105))
-----------------------------VLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH---GAFPRCRREVVKLTAASITAVCRLPIVV-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26204 for 240 contacts (-109.2/contact) +
2D Compatibility (PS) -4550 + (NN) -1241 + (LL) 2520
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -34075.0 ( -141.98 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: