Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---VTCSPTQLSSCVSAITSSSPPSKLCCSKIKEQKPCLCQYLRNPN-------LKRFINTPNARKVASTCGTPFPRC
1E68 Chain:A ((1-70))
MAKEFGIPAAVAGTVLNVVEAGGWVTTIVSILTAVGSGGLSLLAAAGRESIKAYLKKEIKKKGKRAVIAW--------
General information:
TITO was launched using:
RESULT:
Template:
1E68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17001 for 388 contacts (-43.8/contact) +
2D Compatibility (PS) -6312 + (NN) -3713 + (LL) -56
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -29532.0 ( -76.11 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1E68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E68-query.scw
PDB file :
Tito_Scwrl_1E68.pdb
: