Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSDVIKDLRPCVNYLVN---GTG------------KPPSACCAGASALASAASSSSDKKAACECIKSAAKNMK------P-----NAQLAQALPANCGINLPVTIAPNVDCSKVG
1SM7 Chain:A ((13-101))
--------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQ------E--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27922 for 424 contacts (-65.9/contact) +
2D Compatibility (PS) -6525 + (NN) -1905 + (LL) 1764
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -39088.0 ( -92.19 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: