Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TTNEPTVCNIALTKLNLCRPAVT----G-QYPPPPTKECCGLMKQANLTCLCKFKEA--------LPAFE---------IDPARAFALPKKCNLRTPPQCKV
1HSS Chain:A ((12-106))
---------FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD---
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25752 for 381 contacts (-67.6/contact) +
2D Compatibility (PS) -6368 + (NN) -192 + (LL) 760
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -35452.0 ( -93.05 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: