Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAPAPEPTAEAPGPDCFTNLLSLSDCLTYVEAGSNLTKP-------EKPCCPELAGLVESTPQCLCYLLDKNATS---SY------------G----FNIDMNRALNLPTVCKVSTPPVSLCSG
1B1U Chain:A ((16-109))
---------------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31559 for 442 contacts (-71.4/contact) +
2D Compatibility (PS) -7036 + (NN) -3082 + (LL) 984
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -44193.0 ( -99.98 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: