Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASTPSSNCESAQ--MKLVPCLTYVTGS------DSKP-----------PTECCSGLKDLNTNNPTCLCQLITQLNSTSS---GSSNV---NVAKVLALPRDCSVTLITSDCPGKDLL
1W2Q Chain:A ((14-119))
-----SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRA-PQRCDL----
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42422 for 500 contacts (-84.8/contact) +
2D Compatibility (PS) -8531 + (NN) -4752 + (LL) 596
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -61959.0 ( -123.92 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: