Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------ACSLSQVRTCTSAVIAP------------NQMPSQQCCSELSAITDFNCFCSMLLN-----QGTNLNQDYINNALLIPSKCGEQGRNLRGQRCGNYAIP
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL-DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECN-----LMSQPCQM----
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38750 for 478 contacts (-81.1/contact) +
2D Compatibility (PS) -7312 + (NN) -173 + (LL) 424
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -51711.0 ( -108.18 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: