Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICDISSGGIRSCQPAAAVRNPTDAPSAECCAALAGA--DLACLCRYKSVGGM-WV-RFYKID-----VKRAMALPGKCGLTMPANC
3OB4 Chain:A ((429-488))
--------------------------ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23550 for 267 contacts (-88.2/contact) +
2D Compatibility (PS) -5332 + (NN) -2565 + (LL) 756
1D Compatibility (HY) 0 + (ID) 650
Total energy: -31341.0 ( -117.38 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: