Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGCDNDRQ-DMIRECAKYQKFPKE----PK---KDPS-------KACCAVWQKA--DFPCLCKDVTK----------------ELE-KVAYVAKFCKWPFPSGYKCGSYTFPLGQ
1W2Q Chain:A ((15-112))
-SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR----------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6233 for 356 contacts (-17.5/contact) +
2D Compatibility (PS) -6975 + (NN) -6838 + (LL) 168
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -23478.0 ( -65.95 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: