Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASCSTQMASLANDCSALLGSN---DPE-----------APTKDCCDAILAADTRCVCRYVTPMVVRLV------------NMKRVVHIAATCGRNIPHGFKCGNYTVP
1SM7 Chain:A ((15-103))
----------LRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGT---------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50720 for 434 contacts (-116.9/contact) +
2D Compatibility (PS) -6019 + (NN) 1731 + (LL) 1012
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -57246.0 ( -131.90 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: