Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AECKNNIADLLPCQAAAQSETST-----------------PSTECCTAVGKFKDDPACLCSTIAAAQA------AGFTI---DAPVAATIPKRCKLDGYPTSCSKSK
1W2Q Chain:A ((23-112))
-------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR----------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19585 for 401 contacts (-48.8/contact) +
2D Compatibility (PS) -6665 + (NN) -1575 + (LL) 344
1D Compatibility (HY) -4400 + (ID) 450
Total energy: -32331.0 ( -80.63 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: