Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCFLADIQPCIPAIKAT----GPRQ------APTAACCDSISKTSQVCLCQAVSGPETPR-----AGLSVGKALVLPLECGINVPSGTTCAKFFLVVFDLVFA
1S6D Chain:A ((21-97))
------LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--------------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31981 for 379 contacts (-84.4/contact) +
2D Compatibility (PS) -6196 + (NN) -60 + (LL) 2268
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -40519.0 ( -106.91 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: