Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKLGVLLPCLPFLQGQGSNPTQPCCNGLETVVKSNPACLCALVNS---Q-------LG-N--RINITLALSLPSLCNLAGVTIDLCNPTGKFSFKI
2DS2 Chain:B ((8-69))
-----------------------------RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACPF--------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36080 for 260 contacts (-138.8/contact) +
2D Compatibility (PS) -5103 + (NN) -2160 + (LL) 1472
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -47071.0 ( -181.04 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: