Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSSTSFPGAQCCSSLTRFRGNPDCLCSTMLTAR---Q-QFT------FSVPNAFTIPERCGYANEIPPHYKCGNYVVGH
3OB4 Chain:A ((428-483))
------------------------QERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLR----------------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18661 for 238 contacts (-78.4/contact) +
2D Compatibility (PS) -4546 + (NN) 296 + (LL) 1212
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -25399.0 ( -106.72 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: