Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VECKNNIADLLPCQAAAQSETST-----------------PSTECCTAVGKFKDDPACLCSTIAAAQAA---GF-T--I---DAPVAATIPKRCKLDGYPTSCSKSK
1W2Q Chain:A ((23-112))
-------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR----------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20414 for 414 contacts (-49.3/contact) +
2D Compatibility (PS) -6665 + (NN) -1580 + (LL) 392
1D Compatibility (HY) -5200 + (ID) 450
Total energy: -33917.0 ( -81.93 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: