Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYCDLTTLLPCLSSVIGD-----KPTPPSEECCAVVRVVDPDCVCGHVGDDEGI----TGI-N---------VKLAAQIPKKCGRHVPKGFKCGEH
1HSS Chain:A ((16-106))
------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVD------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22534 for 406 contacts (-55.5/contact) +
2D Compatibility (PS) -6238 + (NN) 45 + (LL) 484
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -30443.0 ( -74.98 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: