Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCQGSIQDLKICVPYVQKK----GPKIP---PSQACCDAIKGVDILCVCHHLPPDIGELI-----------------------SIEKVVFVLQVCREPLAPGTKCGSKNIKALLS
1B1U Chain:A ((17-110))
--------LDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG-------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55558 for 410 contacts (-135.5/contact) +
2D Compatibility (PS) -6079 + (NN) 2586 + (LL) 1036
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -63015.0 ( -153.70 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: