Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEAWKLAPCEAAAQNEKAA-----------------PSKSCCLQVKKIGQNPDCLCAVMLSNTAK---S-SG--I---KPEVAVTIPKRCNLADRPVGYKCGAYTLP
1W2Q Chain:A ((23-112))
-------------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14711 for 407 contacts (-36.1/contact) +
2D Compatibility (PS) -6646 + (NN) -3350 + (LL) 348
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -29709.0 ( -73.00 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: