Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGSICRMTQDGLTACKPSVS----GQSPLPP----SPACCAAISKADLPCLCSFKNSAL------LPY-LG----ID---------PNMATQL--PAKCNIVTSTHC
1BEA Chain:A ((12-109))
------IPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23146 for 393 contacts (-58.9/contact) +
2D Compatibility (PS) -6905 + (NN) -2525 + (LL) 432
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -35044.0 ( -89.17 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: