Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVENAADCAAVGTLISSCTEFVNYGYPDPIPGSSCCDAMTVIGTYSDSSEKRKWLCNCFMDLINVY-NSNATAISTLSGFCGVVLGFTIDPNTDCNFIQ
2ALG Chain:A ((1-92))
----MITCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82519 for 631 contacts (-130.8/contact) +
2D Compatibility (PS) -9423 + (NN) -2833 + (LL) -88
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -99913.0 ( -158.34 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: