Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------MIVWYELTLFGVLTHIISNVFFPSESDYLSTIKFLGSFAVGFGFR--PLGAFIFGYIGDKYGRRKVLLTSVILVSISSTAIA--------VIPDFKEIGILS--PILLLLCRIVQGTAAGGETSINSAFLIEHSSDKKDLGFLGSMKAFSGALGSITCFLMIAIVKKFTGENYEI-WGWRLLFYFCSIMGVIGFLTRYIMEESLAYKTHDQNKSLSNSPFL--ELIRSYKKAFMIAIGLGIAQNAIVYSAIMFYNISVKELILSGIDIKNVVRITVEITFGTSAVLFAILSDKVGRKNVMVLILIALACAGLPAFSLLSYDNHYIVTLTFLLISIPIGA-SFG-IYNSLVCELLPTKVRCTGFSLAHNISAGIFGGISPSICM-----WLIEKTETELAAGFYLTMCALISLIYVLQIKTEDKKVDW |
4QIQ Chain:A ((7-470)) | SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAP-AHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335957 for 3212 contacts (-104.6/contact) +
2D Compatibility (PS) -40431 + (NN) 2198 + (LL) 80
1D Compatibility (HY) -24400 + (ID) 4000
Total energy: -402510.0 ( -125.31 by residue)
QMean score : 0.219
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