Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQNGIQVYKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGK-GR
2LW6 Chain:A ((19-98))
-SFVQCNHHLLYNGRHWGTIRKK---------------AGWAVRFYEEKP---------GQPKRLVAICKNASPVHCNYLKCTNLAAGF-----SAGTSTDVLSSGTVGS
General information:
TITO was launched using:
RESULT:
Template:
2LW6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 40750 for 552 contacts (73.8/contact) +
2D Compatibility (PS) -8018 + (NN) 2178 + (LL) 3396
1D Compatibility (HY) -1600 + (ID) 800
Total energy: 35906.0 ( 65.05 by residue)
QMean score : 0.060
(partial model without unconserved sides chains):
PDB file :
Tito_2LW6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LW6-query.scw
PDB file :
Tito_Scwrl_2LW6.pdb
: