Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MISIFVEKGIVELKDENGTPISHKIIKHNIYPHIENKINVSLMEEDSNGKNLLVKGCCDISTIESLIKME
2K5N Chain:A ((1-74))
MAMNGTITTWFKDKGFGFIKDENGDNRYFHVIKVANPDLIKKDAAVTFEPTTNN-KGLSAYAVKVVP-LEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2K5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24657 for 406 contacts (-60.7/contact) +
2D Compatibility (PS) -6912 + (NN) 2230 + (LL) -120
1D Compatibility (HY) 0 + (ID) 800
Total energy: -30259.0 ( -74.53 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_2K5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5N-query.scw
PDB file :
Tito_Scwrl_2K5N.pdb
: