Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEEKIPKNKQEQLGQPKIPVSSQVSNTQNNNQQPNLQSENGSKLPIAAASMLAITGIAFR-GSYCSLPRNVSSRNSNRGLLSCCYYNPISL
1Q90 Chain:L ((1-32))
-------------------------------------------MLTITSYVGLLIGALVFTLGIYLGLLKVVKLI-----------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1309 for 129 contacts (10.1/contact) +
2D Compatibility (PS) -3214 + (NN) 243 + (LL) 1988
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -3724.0 ( -28.87 by residue)
QMean score : -0.049
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: