Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNKIGFLAVFALVISSQIGSGIFMLPISLAPYSTYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYWVISWVSTTALIVVGVGYLTPFLHEEIKNIHLFLELLLFTIITLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFNRNNFIISKEMSSLTISQILARSTLLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYFINNFAIMGLINGNDLANSRAPYVDAIKIMFSGNWHLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIKERNYHKLLTGSIATTFCCWVILETSINTLLIASLFTTSGIPLYLFWYRRASAQ |
3THR Chain:A ((4-293)) | --------------------------------------------------VDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYI---------------------------GDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTG------VDSIMLVEEGFSVTSVD-----ASDKMLKYALKERWNRRKEPAFDKWVIEEA----------NWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQ---------SEHRLALKNIASMVRPGGLLVIDHRNYDY-ILSTGCAPPG--------KNIYYKSDLTKDITTSVLTVNN--------------KAHMVTLDYTVQVPAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPG-------QAYVPCYFIHVLKKTG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203287 for 2167 contacts (-93.8/contact) +
2D Compatibility (PS) -29374 + (NN) 56 + (LL) 11024
1D Compatibility (HY) 11200 + (ID) 900
Total energy: -211281.0 ( -97.50 by residue)
QMean score : 0.044
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