Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MVIVLKLPEVTVNWSYPVLNFDLSFRIILISFLSVAFLIVLPAKNFSFSEMLSFFAYTISSLCAILSKQIISVIIFCELMAISASFIIAAGCKDNGPAIRYACVHFFVGIILTAGLAIQNPNLIIMGLLIICACFPFSFWVVDAYPAASLHGASYLSLFTTKISFLIALLHTYN---LWQDHAEILAFLGTITAIYGIIFTSLEQNIRRFLAYNVVGQMGILIMTGSLLSHSKNAIPLLILNIIFSIVYQLLLTAVANSIILRTKAVNFNRVGKFMSAEGIYALIAILTMAAFPGTAGFISKSYIAVEIKMNGTNLELYKNLHKILNLSLYLSVGLKFLYYIFITKSRSKLLAEKGGGVAMIILASICVIAGNPYLPIYNKPSIFNLAYNTKNIWSQLNLLLCVTLLFIPLRKLFLPRINLKMDIDWIFRALIPYVVSLFNKLIFKMRKISAGALQNLTNSLTNLYFNNANKLKEALSYDSVSFISASSLFLMSILLVLLCLNH |
| 3RFY Chain:A ((78-433)) | GGILLVANPVIP----------------------DVSVLISGP----PIKDPEALLRYALP----IDNKAIREVQKPLEDITDSLKIAGVKALDSVERNVRQASRTLQ-----------QGKSIIVAGF----------------AESKKDHGNEMIEKLEAGMQDMLKIVEDRKRDAVAPKQKEILKYVGGIEEDMVDGFPYEVPEEYR--------NMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRSDGFVVQ----TGDPEGPAEGFIDPS----TEKTRTVPLEIMVTGEK--------------------TPFYGSTLEELGLYKAQVVIP------FNAFGTMAMAREEFENDSGSSQVF------------WLLKESELTPS----------------------NSNILDGRYAVFGYVTD-----------NEDFLADLKVGDVIESIQVVSGLEN-----LANPSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245049 for 2494 contacts (-98.3/contact) +
2D Compatibility (PS) -35493 + (NN) 14916 + (LL) 15416
1D Compatibility (HY) -5600 + (ID) 3200
Total energy: -259010.0 ( -103.85 by residue)
QMean score : 0.108
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