Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKLSYILIVIFISFPILLAASENNEKTQIKDIKCIGNERVGDQTIKFYIKLEPDSYVNDDDIDSIIKSLYKTKLFASVHAYIDNEKKLVIKVQENPLINKVILKGNKQFKSKELLNNVIQSKPLTIFTETKLQSDLVNLVTLYRHNGKIGVKVEYELDKLDGNRVNLIFKVKEGKTSRVKSVRFIGNKNFSENELERAIKVQSNDIFNKLFRAIFKGGNHYSPQYLLTNEELLDRFYSSKGYINNSIQPIAEIDNNNQIELTFLIDEGQQYLFGSNKVNVEAEIQ-DPDLKEKVLELIT--KEDNKVFDRVKVSNAVEKINKYLNEIGYIFAKVNPEYT-QH--GNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNTSEVQKSRRR----LIGSDFFET-VKINSYA-INDNAVNLDLNVKEKNTTSLYLGGGVSFPGGAFIKTDFKDRNLFGTGKELSFALEKSQYVFSTNVEVVENNFNDSDTSLGVDVFYERQDKPNTTFDSCDWGGIAQLLHKIIENLTNSIRYSYKYNHIHMDNKGGKDEDISEIIRSQQGEYQISSVGYTLAYNKLDNLYAPREGYLLRLSQDISGLGGNMNFLKSEFLSFYTHPILSKIDDDIILRFKMAAGYIFSYTDKELNIGQRFFKGGNEIRGFDLSGIGPRAKDKNKSSLGGKTYFNLTQQVDFPLPKLYDYVGIKGSLFVDYATLFGLDIKKEYEGKYHDSKLVRVSPGFGFSMPSPFGGRFRLDFGFPLAKEPYDIIPSSNIKFSIEVGI |
| 2QDF Chain:A ((5-333)) | ---------------------------------------------------------------------------------------------AEGFVVKDIHFEGLQRVAVG-AALLSMPVRTGDTVNDEDISNT---IRALFATGNFEDVRVLR-------DGDTLLVQVKERP--TIASITFSGNKSVKDDMLKQNLEASG-----V------RVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIV--GNHAFTTDE---LISHFQLR-------QKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36672 for 2110 contacts (-17.4/contact) +
2D Compatibility (PS) -32908 + (NN) -8947 + (LL) 25976
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -67151.0 ( -31.83 by residue)
QMean score : 0.431
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