Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKPKIQGSRIIPIEKYGLHTISIGYFIDKDCAAMWRGPMITKALYNLLMGTKWSDIEYLVVDTPPGTGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYNMFTKLSVPIFGIVENMSYFIQDNSKIYIFGKDGTKVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSEDLAGIYEDFAKDIRSFI |
| 5AUQ Chain:B ((14-222)) | -----------------------------------------------------------------------------------------RLEGVKRIIPVVSGKGGVGKSLVSTTLALVLAEKGYRVGLLDLDFHGASDHVILGFEPKEFP----GVVPPTVHGIKFMTIAYYT------PLRGKEISDALIELLTITRWDELDYLVIDMPPGLGDQLLDVLRFLKRGEFLVVATPSKLSLNVVRKLIELLKEEGHKVIGVVENMKL------------KDVEK-LAEEFGVPYLVGIPFYPDLDAKVGNVEELMKTEFAGKVRELAGRL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149224 for 1575 contacts (-94.7/contact) +
2D Compatibility (PS) -20755 + (NN) -13283 + (LL) 8476
1D Compatibility (HY) -18000 + (ID) 3750
Total energy: -196536.0 ( -124.78 by residue)
QMean score : 0.493
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