Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKGKELSSDVYEANIVLNDKTMATLPKIGYHMLNDQLVMHNHVTEEKVVISRDFHFLKAVKF----SDDYKLTFYNALGNEFFEYKKYDLQYSNISDKNKFIGLNCAKKIQFESRRVI
3FS3 Chain:A ((97-161))
-----------------------PNLPEFWLRALRNNNTVSHVIEDHDEEI---LVYLNDIRCDYIK--GFILSFY-FATNPFFSNSVLTKTYHMKVLLHTEATVIDWYDNKNILKKRD
General information:
TITO was launched using:
RESULT:
Template:
3FS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25856 for 272 contacts (-95.1/contact) +
2D Compatibility (PS) -5657 + (NN) -1078 + (LL) 1436
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -36105.0 ( -132.74 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_3FS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FS3-query.scw
PDB file :
Tito_Scwrl_3FS3.pdb
: