Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIKVQRKKMELGAEVADQFLSEMNQTKIKIQDAKEATE--TARNVSKSFAQNAKDKNTELHDKVVNFTKKAETASENAEDFAREAFLSK-QSTKTLKQETKEL
1WV9 Chain:A ((2-90))
-------------RKVRPEELPALLEEGVLVVDVRPARSTPLPFAAEWVPLEKIQKGEHGLPRRPLLLVCEKGLLSQVAALYLEAEGYEAMSLEGGLQAL----
General information:
TITO was launched using:
RESULT:
Template:
1WV9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 44381 for 601 contacts (73.8/contact) +
2D Compatibility (PS) -8708 + (NN) 539 + (LL) 1628
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 35890.0 ( 59.72 by residue)
QMean score : 0.118
(partial model without unconserved sides chains):
PDB file :
Tito_1WV9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WV9-query.scw
PDB file :
Tito_Scwrl_1WV9.pdb
: