Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNRIVIGISGASGSIYGMHILKALKGADCETHLVISRAGKTTIAHEITERLEDITSLADFYYSE--------------EKIGEKIASGSFKTSGMIVAPCSMKTMSEIASGVTSNLLTRAADVTLKERRKLVLIVRESPLHLGHLQNMLKLTEMGAIIAPPMPAFYTKPKSLEDIISHSISKVLSLFDIKLPDFKEWQGV
4RHE Chain:D ((8-205))
FNGKITLAITGASGASYAMRLIECLIAANYQLYILCSSAGRIVLDTEVGVKIPSSPDAASKFLTEKYQAKDQQITVFGKEQWFSPVASGSSAPKQMVVCPCSTGTMAAICHGMSDNLIERAADVVIKERGQLILMVRETPFSTLHLQNMLSLSQQGVTIMPASPGFYHKVETIEDLIDFMVGRVLDHLGIEQDIMPRWGYN
General information:
TITO was launched using:
RESULT:
Template:
4RHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126008 for 1461 contacts (-86.2/contact) +
2D Compatibility (PS) -19687 + (NN) -7763 + (LL) 0
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -173258.0 ( -118.59 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_4RHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHE-query.scw
PDB file :
Tito_Scwrl_4RHE.pdb
: