Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHIPVLLKEMLLQLSPQNGGIYVDATFGAGGYSKAILESADCKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGERHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
1WG8 Chain:A ((4-283)) | MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKGLHL---PGLTVVQGNFRHLKRHLAALG----------------------------------V---ERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLEG-PTAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVGFR-RAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRESG---------LKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKEA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150540 for 2407 contacts (-62.5/contact) +
2D Compatibility (PS) -30659 + (NN) -12160 + (LL) 2852
1D Compatibility (HY) -22000 + (ID) 6050
Total energy: -218557.0 ( -90.80 by residue)
QMean score : 0.553
|
|
|