Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILAIDTVGTGGSSIAIIDHDGNCFVEHNS-ISNSHAESFFQILNTLFNKHNYNYSKLDHLAVVVGPGSFNGIRVGISAAKGINLVTNKPLYGVNALEVQAYAMSLLCANNKKNIRAMIKS-SQGFYMQLFDCNLLPLSDPTTTHDAQCLGTRTSGNNYITYMDCNLPKLDASHAGLLVHYRLKNKQKLNEVEALYLNELQYMKLL
3R6M Chain:A ((2-131))
AKILAIDTATEN-CSVALLVND-QVISR-SEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLH--GATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQEL
General information:
TITO was launched using:
RESULT:
Template:
3R6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81061 for 935 contacts (-86.7/contact) +
2D Compatibility (PS) -13756 + (NN) -4605 + (LL) -236
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -109758.0 ( -117.39 by residue)
QMean score : 0.322
(partial model without unconserved sides chains):
PDB file :
Tito_3R6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6M-query.scw
PDB file :
Tito_Scwrl_3R6M.pdb
: