Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLKTMMLNFGPQHPAAHGVLRLVLEMDGEIIERADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNISSQAL-DVGAMT----------------------------------------------------------------------PLLWLFEEREKILEFYERASGARFHAAYIRPGGVAADV--PEGLIEDIAKFIEQFPQYID-----DVD-------EL--------LTENRI-------WKQRTVGISEISIK---------------------------------------------QALD----------WGFSGPMLRAAGL----AWDLRKSQPYEIYDQLDFDIPVGQNGDCYDRYLVRMEEIRQSVSLVKQCIEKIPEGPVKTEDRKISPPPRTEMKRSMEALIHHFKLYSEGYHVPEGEAYAAVEAPKGEFGVYIVSDGTNRPYRCRIRAPGFAHLQALD---------FMAKGHMLAD------VAAIIGSLDIVFGEIDR |
| 1YQ9 Chain:H ((7-535)) | ------NKIVVDPITR-IEGHLRIEVEVEGGKIKNAW-SMSTLFRGLEMILKGRDPRDAQHFTQRACGVCTYVHALASVRAVDNCVGVKIPENATLMRNLTMGAQYMHDHLVHFYHLHALDWVNVANALNADPAKAARLANDLSPRKTTTESLKAVQAKVKALVESGQLGIFTNAYFLGGHPAYVLPAEVDLIATAHYLEALRVQVKAARAMAIFGAKNPHTQFTVVGGCTNYDSLRPERIAEFRKLYKEVREFIEQVYITDLLAVAGFYKNWAGIGKTSNFLTCGEFPTDEYDLNSRYTPQGVIWGNDLSKVDDFNPDLIEEHVKYSWYEGADAHHPYKGVTKPKWTEFHGEDRYSWMKAPRYKGEAFEVGPLASVLVAYAKKHEPTVKA-VDLVLKTLGV--GPEALFSTLGRTAARGIQCLTAAQEVEVWLDKLEANVKAGKDD-LY--------------------T-DWQYPTESQGVGFVNAPRGMLSHWIVQR-GGKIENFQLVVPSTWNLGPRCAEGKLSAVEQALIGTPIADPKRPVEILRTVHSYDPCIACGVH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165837 for 2955 contacts (-56.1/contact) +
2D Compatibility (PS) -36739 + (NN) -7409 + (LL) 1988
1D Compatibility (HY) -4800 + (ID) 2900
Total energy: -215697.0 ( -72.99 by residue)
QMean score : 0.355
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