Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MEKLHDQKVTENLQDTPKKATIEGKDFEQSRQKETSVQTETQSSVNTGVRTSQ-KPKSQAVSFSIGKGSTEKKSSNKPKSSEKGIVCLSHK--------KIKKKEGFLSLLKR----FVKRVLEKHF--- |
2HRV Chain:A ((1-139)) | GPSDMYVHVGNLIYRNLHLF--NSEMHESILVS--YSSDLIIYRTNTVGDDYIPSCDCTQATYYCKHKNRYFPITVTSHDWYEIQESEYYPKHIQYNLLIGEGPCEPGDCGGKLLCKHGVIGIVTAGGDNHVAFIDLRHFHCA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 47630 for 755 contacts (63.1/contact) +
2D Compatibility (PS) -11273 + (NN) 819 + (LL) 512
1D Compatibility (HY) -4800 + (ID) 700
Total energy: 32188.0 ( 42.63 by residue)
QMean score : 0.210
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