Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC
4NYE Chain:B ((22-252))--SKQLIYSGKAKDIYTTEDENLIISTYKDQATAFNGVKKEQIAGKGVLNNQISSFIFEKLNVAGVATHFVEKLSDTEQLNKKVKIIPLEVVLRNYTAGSFSKRFGVDEGIALETPIVEFYYKNDDLDDPFINDEHVKFLQIAGDQQIAYLKEETRRINELLKVWFAEIGLKLIDFKLEFG--FDKDGKIILADEFSPDNCRLWDADGN-HMDKDVFRRGLGELTDVYEIVWEKLQEL--


General information:
TITO was launched using:
RESULT:

Template: 4NYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88907 for 1805 contacts (-49.3/contact) +
2D Compatibility (PS) -24963 + (NN) -6198 + (LL) 664
1D Compatibility (HY) -22000 + (ID) 5750
Total energy: -147154.0 ( -81.53 by residue)
QMean score : 0.318

(partial model without unconserved sides chains):
PDB file : Tito_4NYE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NYE-query.scw
PDB file : Tito_Scwrl_4NYE.pdb: