Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVVLSGYGLNCEKETAFAFVECGRKLGVNNIEVRIVHINEIIKNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKNNLLDKFQEFLSQDKLVIGICNGCQILAKLIPEFSNLALIRNDIGNYQCRWIKVKVSPQSSSVWLQDL-NELYLPIAHGEGKFFMNQGVLDQLIENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGRVLALMPHPERGIFFTQQDNWPLEKEKCKRLKIAMPKYGDGMLIFENALRYFC |
| 2A9V Chain:A ((15-185)) | -KIYVVDNGGQWT-HREWRVLRELGVD-------TKIVPNDID---SSELDGLDGLVLSGGAPNIDEE----------LDKLGSVGKYIDDHNYPILGICVGAQFIALHFGAS----VVKAKH--PEFGKTKVSVMHS--ENIFGGLPSEITVWENHNDEII--------NL-PDDFTLAASSA--------------TCQ---VQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGICASYREIQKE---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88347 for 1391 contacts (-63.5/contact) +
2D Compatibility (PS) -18972 + (NN) -8984 + (LL) 3288
1D Compatibility (HY) -800 + (ID) 1650
Total energy: -115465.0 ( -83.01 by residue)
QMean score : 0.299
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