Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVSSDTELIKSTIMSIIDQN-KGRDIVTFDVQNKTIIA--KYMIIASGDSSRHVKALAEHVMKSLKQYYKMDVEGMDEGNWVILNFQGIMVHIFRPEVREYYKIEELWN
2Q5W Chain:E ((58-119))
--------EKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26495 for 334 contacts (-79.3/contact) +
2D Compatibility (PS) -6422 + (NN) -4314 + (LL) 2112
1D Compatibility (HY) 800 + (ID) 450
Total energy: -34769.0 ( -104.10 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2Q5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q5W-query.scw
PDB file :
Tito_Scwrl_2Q5W.pdb
: