Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKALNVCYIGSKIKLLIETCANNRENTTQLYGFINKEEQSCLRLLVKVSGVSYKTAMSILSKLTPEQLFLAIMNEDKIAL-KISGLGPKLINRIITELSGKVSKLETNNNNFYPINEDAVSALINLGYEKTKVYDTIKKYKPNLDTKDIIRTALKELSNYEIDIMQ
1IXR Chain:A ((1-135))
MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQALEEGKEVGVHTHLLLK--EEGLSLYGFPDEENLALFELLLSVSGVGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKVPPHL------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123278 for 1025 contacts (-120.3/contact) +
2D Compatibility (PS) -14429 + (NN) -2986 + (LL) 3760
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -147083.0 ( -143.50 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_1IXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXR-query.scw
PDB file :
Tito_Scwrl_1IXR.pdb
: